Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MIQVCSQCGTGW------------NVRE----------------------------------RQRVWCPRCRGMLLAPLADMPAEARWRTPARPQV-----------PTASDTRRTPPRLPPGFRWIAVRPGAAPPPRHGPRLRG----PTPRYAGIPRWGLTDHVDQAPVPASAKAGPSPAAVRTT-----LLVSLLVFSIAVVVFVVRYVLLVINRNTLLNSVVASASVWLGVLVSLAAIAAAGTTIVLLVRWLVARRAAAFMHQGLPERRSARELWAGCLLPMVNLLWAPLY---VIELALVEDRYTRLRRPIVVWWI-------------VWIV--------------------SNAISMFAFATSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFE-----------GFEQKPVERPAHRWVVVNTDGRSAPASSVAVELDGQEPAA------------------------------------ |
| 1Q16 Chain:B ((1-509)) | MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151293 for 2305 contacts (-65.6/contact) +
2D Compatibility (PS) -35200 + (NN) -8428 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 2000
Total energy: -199721.0 ( -86.65 by residue)
QMean score : 0.037
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