Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPHKVAFPARCAVNICYDKHLCSQVFPAGIPVEGFFEGMVEL------FDADLKRKGFDGV-ALPAGSYELHKI-NGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAA-MGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAV-GVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAAC-----APPGALGAAHALIGLVVVVLGAITI-----GVATRKR--WQTAVVTAVVTVCGILAAV---------AAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVA-RVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAVQVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLTVGLFITQGRGFAAKYQAVALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPATRFRPIIRLTVEWLEVLAMIALLPAAAALGGLFAWLRH |
| 4O6D Chain:A ((19-377)) | --LYFQSNADTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPETPQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEAVKDELNTLLKENGV---DLSVVVEKQEG-----MYKSAPKRLTATANNTFVVDGPETKECPTQNRAWNSLEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDT-----WKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226478 for 2229 contacts (-101.6/contact) +
2D Compatibility (PS) -31849 + (NN) 2651 + (LL) 17248
1D Compatibility (HY) 1200 + (ID) 2750
Total energy: -239978.0 ( -107.66 by residue)
QMean score : 0.111
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