Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGND--LLGLARNVGEVYGVFATFHP-QKSKFHLLGMDYLKIN-SAN-FHGLGKLEDLIKKIGPPKWPWA--------VDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL |
1IQC Chain:A ((64-282)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPINAPTVLNSSMNLAQFWDGRAKDLKEQAAGPIANPKEMASTHEIAEKVVASMPQYRERFKKVFGSDEVTIDRITTAIAQFEETLVTPGSKFDKWLEGDKNALNQDELEGYNLFKG----SGCVQCHNGPAV--GGS--SYQKMGVFKP----Y--E-------TKN---------------------------------------PAAGR-----------MDVTG-----NE-ADRNVFKVPTLRNIELTYPYFHDGGAATLEQAVE--------TMGR-----------------------------IQ---------LNREFNKDEVSKIVAFLKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43217 for 1489 contacts (-29.0/contact) +
2D Compatibility (PS) -21466 + (NN) -9801 + (LL) 21080
1D Compatibility (HY) 1600 + (ID) 1700
Total energy: -53504.0 ( -35.93 by residue)
QMean score : 0.136
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