Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MEKFKGALVVGALR-----LFALLPWRAV-QGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLT-ESACAW---------IWPP-EKSL----------RYIREVEGMEVL-EEALASGDGLVGITSHLGNW-EVLNHFYCSYAKPIIFYRPPK-LKAVDELLKKQRVQLGN-RVAPSTPE---------GILSVI-----KEVKKG---GCVG---IPADPEPAR-TAGLFVPYLGTTALI--SKFVPQLLSRGKARGVFFHAVRLPDGSGY-------------KVILEAAPADMYDKDL-------EVSVAAMSREL-------AKYVRAYPSQYMWSMKRFKNRPDGEKKWY- |
| 4FS7 Chain:A ((2-394)) | YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVNIPPVVTYKDNKYDVVSIGYAAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVS--LPDSMETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSS---LTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89238 for 1889 contacts (-47.2/contact) +
2D Compatibility (PS) -29092 + (NN) 3748 + (LL) 168
1D Compatibility (HY) -17600 + (ID) 3000
Total energy: -135014.0 ( -71.47 by residue)
QMean score : 0.148
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