Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAP-RDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQA-SLVAADARATGEWW--DGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLPGP-------WGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR
3AJD Chain:A ((9-274))------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMQFIRVNTLKINPEVLKKRLENKGVVLEKT-FLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCS----------------EEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIKANEFKGINIKEGYIKGTLRVFPP---NEPFFIAKLRKI---


General information:
TITO was launched using:
RESULT:

Template: 3AJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94198 for 2004 contacts (-47.0/contact) +
2D Compatibility (PS) -26590 + (NN) -15753 + (LL) 14384
1D Compatibility (HY) -15200 + (ID) 3200
Total energy: -140557.0 ( -70.14 by residue)
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_3AJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AJD-query.scw
PDB file : Tito_Scwrl_3AJD.pdb: