Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAV-YRLLALKARPVEKGLIVVAANIHQLDFLLE-D-LPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
1HRU Chain:A ((3-188))
NNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELK-QRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFP-VVPGETGGRLNPSEIRDALTGELFR--
General information:
TITO was launched using:
RESULT:
Template:
1HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124683 for 1433 contacts (-87.0/contact) +
2D Compatibility (PS) -19588 + (NN) -12375 + (LL) 212
1D Compatibility (HY) -12000 + (ID) 4350
Total energy: -172784.0 ( -120.58 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HRU-query.scw
PDB file :
Tito_Scwrl_1HRU.pdb
: