Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWE------RPAGGG--GRTRVIGDGALIE----KGGV---NFSHVFGDSLPPSASAHRPELAGRGFQALGVS--LVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHE--------EDCVHWHRVARDACAPFG-----------------ADVYPRYKEWCDRYF--------HLKHRNEP------RGIGGLFFD-DLNQWDF-------DTCFAFIRAIGDAYIDAYLPIVQ----RRKHTPF-----DERQREFQAY-----------RRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWK----------PEPGSEEARLTEYFLADRDWLAGQP------------------------------------------------ |
| 1QF5 Chain:A ((1-431)) | --------GNNVVVLGTQW-----GDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVIN-GEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRG--IGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13327 for 2055 contacts (-6.5/contact) +
2D Compatibility (PS) -30487 + (NN) -3333 + (LL) 1572
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -59975.0 ( -29.18 by residue)
QMean score : 0.037
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