Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQ--------ASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 3GPK Chain:A ((5-106)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEAS--TAAVGGDLGWIRLAQLPTEL-ATTAASMGPGQLAGPVEIRGGFSILYLIDKREGHHHHHH------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19202 for 689 contacts (-27.9/contact) +
2D Compatibility (PS) -10093 + (NN) -8082 + (LL) 24708
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -18819.0 ( -27.31 by residue)
QMean score : 0.393
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