Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGG---LLYGPRSPRYGSD |
2LC0 Chain:A ((1-132)) | MGSQKRLVQRVERKLEQT---------------VGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGN-RLLAPNEYIITLGVHDFEKLGA------------------------DPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42015 for 894 contacts (-47.0/contact) +
2D Compatibility (PS) -13842 + (NN) -4003 + (LL) 960
1D Compatibility (HY) 0 + (ID) 750
Total energy: -59650.0 ( -66.72 by residue)
QMean score : 0.283
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