Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQG-HSHAAVAIAYAPAVPPAVLYHGTASRFLDS-IRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1UF2 Chain:C ((1-421)) | MSRQMWLDTSALLEAISEYVVRCNGDTFSGLT-----------TGDFNALSNMFTQLSVSDPRVPLQTMSNMFVSFITSTDRCGYMLRKTWFNSDTKPTV-----SDDFITTYIRPRLQVP--------------MSDTVRQLNNLSLQPSAKPKLYERQNAIMKGLDIPYSEPIEPCKLFRSVAGQTGNIPMMGILATPPAAQQQPFFVAERRRILFGIRSNAAIPAGAYQFVVPAWASVLSVTGAYVYFTNSFFGTIIAGVTATATAADAATTFTVPTDANNLPVQTDSRLSFSLGGGNINLELGVAKTGFCVAIEGEFTILANRSQAYYTLNSITQTPTSIDDFDVSDFLTTFLSQLRACGQYEIFSDAMDQLTNSLITNYMDPPAIPAGLAFTSPWFRFSERARTILALQNVDLNIRKLIVRHLWVITSLIAVFGRYYRPN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2230 for 873 contacts (2.6/contact) +
2D Compatibility (PS) -15626 + (NN) -2144 + (LL) 2096
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -16394.0 ( -18.78 by residue)
QMean score : 0.102
|
|
|