Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQREAMLIDAQFSRADAEQLVKRIQA--SGKTLSTIYISHGDPDFYFGLDVLKAAF----PEAKILATAQTVAHIQATKD--------AKLAYWGPILKDN---------------APTSLVVPE-PL--KGDQLKLEGHALKVVDLKGP-SPDRTVLWIPSLKTVVGGVLVESGSHVWTA-DTQTQASRQAWVAMLDRIE---ALQPRRVVPGHFTGEEPK--GLDGVRFTRDYLKALEAEL----PKARDSAALVEAMK-----RRYPNL-PGEEGLELSAK-VLKGEMQWP |
| 2CFU Chain:A ((121-422)) | ------------------------------------------DLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAI---VLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHNWPRWGNAEIVEVLEKQRDLYGYLHDQTLHLANQGVTIGQVHNRLRLPPSLDQEWYDRGYHGSVSHNARAVLNRYLGYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68073 for 1997 contacts (-34.1/contact) +
2D Compatibility (PS) -26582 + (NN) -9024 + (LL) 3672
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -109607.0 ( -54.89 by residue)
QMean score : 0.484
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