Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEI--ARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDP---YQPLERERRLTRQVLEVLLRFRH---PLTIVTKGSLILRDLDLLRELAEQNLVAVMISLT---TLDDELKRILEPRAA-APSARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 2YX0 Chain:A ((11-342)) | KITVQANPNMPKEVAELFRKQHYEIVGRHSGVKLCHWLKKSLTEGRFCYKQKFYGIHSHRCLQMTPVLAW---------CTHNCIFCW-RPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHKRGFTTFIVTNGTI----PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPT-RTVVRLTLVKGENMHSPEKYAKLILKARPM---FVEAKAYM---NRLTINNMPSHQDIREFAEALVKHLPGYHIEDEY--------------EPSRVVLIMRDDVDPQGTGVEGRFIKH---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62763 for 2530 contacts (-24.8/contact) +
2D Compatibility (PS) -32757 + (NN) -15005 + (LL) 2088
1D Compatibility (HY) -2800 + (ID) 2050
Total energy: -113287.0 ( -44.78 by residue)
QMean score : 0.343
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