Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MDAQAAARLGD-EIAHGFGVAAMVA---------GAVAG-ALIGAAVVAATAATGGLAAVILAGSIAAGGLSMFQIVKGLTTIFELPEPTTGVLI---RGSFNVYVNSRNAMRAGD---DVSATCSGLPLNHP------LWPFPVLIAE---------GSATVYINGKPAARLQSKMVCGAHIKTGSQNTFIGGPTERVAFVLDLEEWLHTGLEALGLAALA-GGLLLAAMAGVAALVGVVAIGGLMMGGMALLGDLGDRLGPGYRDLFQGVAGMALLGFGPKLAGRRPAAVTSETAQRRAYLNNKFGRSGNLDHDINYRGNRETAAKFFK--SKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQYQSPGAPQGNWYTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAAPTDDFWSVKGQSYPAKGGAQQLFSNEKGSFGLLPREGS |
| 3WRY Chain:A ((8-431)) | SPRVFCIGTADTKFDELRFLSEHVRSSLNSFSNKSSFKVGVTVVDVSTSWKETNSCADFDFVPSKDVLSCHTLGEETMGTFADTRGLAIAIMSKALETFLSIANDEQNLAGVIGLGGSGGTSLLSSAFRSLPIGIPKVIISTVASGQTESYIGTSDLVLFPSVVDICGINNVSKVVLSNAGAAFAGMVIGRLESKFTVGVTMFGVTTPCVNAVKERLVKEGYETLVFHATGVGGRAMEDLVRGGFIQGVLDITTTEVADYVVGGVMACDSSRFDAILEKKIP----LVLSVGALDMVNFGPKTT------IPPEFQQRKIHEHN--------EQVSLMRTTVGENKKFAAFIAEKLNKASSS-------------VCVCLPEKGVSALDAPG--------------------KDFYDPEATSCLTRELQMLLENNERCQVKVLPYHIND----------------AEFANALVDSFLEISPK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104821 for 2893 contacts (-36.2/contact) +
2D Compatibility (PS) -36901 + (NN) 1309 + (LL) 1444
1D Compatibility (HY) -9200 + (ID) 3150
Total energy: -151319.0 ( -52.31 by residue)
QMean score : 0.210
|
|
|