Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLM-AWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQL-MERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEVYLEDDIPHIG-MRRA
1XEB Chain:A ((2-150))
-SLDWTCKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVG-DTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGLGHQLMERALQAAERLWL-DTPVYLSAQAHLQAYYGRYGFVAVTEVYLEDDIPHIGMRRA-
General information:
TITO was launched using:
RESULT:
Template:
1XEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48635 for 966 contacts (-50.3/contact) +
2D Compatibility (PS) -14923 + (NN) -883 + (LL) 308
1D Compatibility (HY) -2400 + (ID) 2850
Total energy: -69383.0 ( -71.83 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_1XEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEB-query.scw
PDB file :
Tito_Scwrl_1XEB.pdb
: