Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPE-GDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
3HT1 Chain:A ((36-113))
--------------ADRFVLTEFEVSPNGSTPPHFHEWEHE-IYVLEGSMGLVLPDQGR-TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPC
General information:
TITO was launched using:
RESULT:
Template:
3HT1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18793 for 481 contacts (-39.1/contact) +
2D Compatibility (PS) -8526 + (NN) -1862 + (LL) 1056
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -33325.0 ( -69.28 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_3HT1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HT1-query.scw
PDB file :
Tito_Scwrl_3HT1.pdb
: