Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFPI-P-EVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALID--QGVDVVFQHTDSPA--PIQAAERRG------VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 2FEP Chain:A ((16-263)) | ---------------------------------TTTVGVIIPD-I-SSIFYSELARGIEDIATMY-K-YNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKR-SPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKG-HTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDY-TYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88198 for 1997 contacts (-44.2/contact) +
2D Compatibility (PS) -26026 + (NN) -9137 + (LL) 6904
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -121557.0 ( -60.87 by residue)
QMean score : 0.470
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