Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNFYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVG-FGVDALGLLGVRLD--GGGRAGKSGLDRQPGTVFPLESNGEPVHDFASLG-LTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGP-GVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPF----LNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTA--------------RGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLPLL |
| 3SY7 Chain:A ((3-420)) | ---------------------FVSDQAEAKGFIEDSSLDLLLRNYYFNRD---------DRVDWTQGFLTTYESGFTQ---GTVGFGVDAFGYLGLKLDGT-------------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATYA------GETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKA-K-------------------AGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAG--GD--SIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQ-----GEGDQNEFRLIVDYPLSIL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20517 for 2817 contacts (7.3/contact) +
2D Compatibility (PS) -36767 + (NN) -5090 + (LL) 532
1D Compatibility (HY) -22800 + (ID) 5950
Total energy: -49558.0 ( -17.59 by residue)
QMean score : 0.312
|
|
|