Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAARKVQITMKTPARRRVGLLLASLCLPLFAQAAETQPTHEFSLDNGLKVIVREDHRA--PVVVSQLWYRIGSSYETPGLTGLSHALEHMMFKGSRKLGPGEASRVLRDLGAE-----ENAFTTDDYTAYYQVLAR---DRLPVALEMEADRMAHLSLPVDQFKSEIEVIKEERRLRTDDNPNALAFERFKAAAYPASGYHTPTIGWMADLQRMTIDDLRHWYESWYAPNNATLVVVGDVTADEVKTLAKRYFGEIPWRQLPPARKP-LELAEPGERRLKLYVRTQLPNLIMGFNVPSLGSSENPREVN------ALRLIGALLDGGYSARLASRLER--GEELVAGASTYYDAFNRGDSLFVLSATPNVQKGKTLEQVEAGLWKQLDDLKQNPPSAAEIERVRAQMIAGMVYE-----KDSIAAQASSIGQLESVG---LSWKLIDQDLE-ALKAVTPDDIQKAARTYFTPSRLTLAQVLPVKAEEKEARHE |
| 3GO9 Chain:A ((20-453)) | --------------------------------LQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALMSSASFTPAQLQSLW-QQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIATF-PQNIQEPWWR---YRLKGSSLIGHD-P-GQPVTQPVDVEKLKQFYQQWYTPDAMTLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPE-PVSLMNEQAAQDTLSLMWDTPWHPI----QDSMALSRYWRSDLAREALFW----HIKQVLEKNNQKNLKLGFDCRVQY---QRAQCAIHLNTPVE---NLTANMTFVARELAALRANGLSQAEFDALMTQKNDQLSKLFATYARTDTDILMSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDT-TLVLMQPKGEPEVNVKAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110169 for 3115 contacts (-35.4/contact) +
2D Compatibility (PS) -44796 + (NN) -20881 + (LL) 3968
1D Compatibility (HY) -5200 + (ID) 3550
Total energy: -180628.0 ( -57.99 by residue)
QMean score : 0.422
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