Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSY-NGDLAKLKRMVEISHVSWDVVEVE-APELARGCEEGLFEKLDMAKVGDPADFVPGA----VQPCGVGIFVWTTLLAYNPGKVAG--SPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYI-HWW-KSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQ-----RLA-MVWS----GGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 1Q35 Chain:A ((2-312)) | ----------------------NEVNVYSYRQP---YLIEPMLKNFEKDTGIKVNIIFAD-GLVDRVKQEG-EL-SPADVLLTVDISRVMEIVNADLAQKIDSKVLE--KNIPAQFRDSNDQWFGLT--TRARVIYTSKDRVGKLPAGFDYLDLAKPE-YKGKVCVRSGKNSYNVSLFAAMIEH-----------YGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGNSYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIE--PSAIV-KGWGT----F-KSDTIKLEDIAKNYEAALKLVDEVKFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109978 for 2464 contacts (-44.6/contact) +
2D Compatibility (PS) -31607 + (NN) -10449 + (LL) 3188
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -154446.0 ( -62.68 by residue)
QMean score : 0.388
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