Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3OMF Chain:A ((8-114))
-SCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKE-CPEGYRVVNNIGEDAGQTVKHIHFHILGGKKLAWDKL
General information:
TITO was launched using:
RESULT:
Template:
3OMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95544 for 741 contacts (-128.9/contact) +
2D Compatibility (PS) -11831 + (NN) -8338 + (LL) 36
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -131677.0 ( -177.70 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_3OMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMF-query.scw
PDB file :
Tito_Scwrl_3OMF.pdb
: