Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITG-----EAAEVGMMGYSSLEQ----KTAGIHMRQWARA----------FVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLK-AKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRS-IERAQARLQPGRLFYGSGELRNANRNRSLLSHLKNPDIVGYEDGIDPQM-SVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRK---SGFVAAFAQTNAGN-L-SP-------NLNLKPGSGPFD--------NEFDNTREIGLRQFAKA--------YEIAGQAQ-EEVLGELDSRF-RFVDFT-RLPIRPE-FTDGQPRQLC---TAAIGTSLAAGSTEDGPGPLGLEEGNNPFLSALGGLLTGVPPQELVQCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIRRAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPETVATDNDWDTQYRWERVGISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRSFEVLGTTP |
| 4L8N Chain:A ((6-457)) | ---------NTSICRLGFTYDISQSK---NWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLG--ANEKEPTYRYNFSHSKMEKFPFLNYAAAEAEA-------EYLLQFGIRIIDQKDIP-GRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADASQS---------SDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24071 for 2611 contacts (-9.2/contact) +
2D Compatibility (PS) -39660 + (NN) 2233 + (LL) 16928
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -58920.0 ( -22.57 by residue)
QMean score : 0.068
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