Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPH--------GVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDAAG-RSERLSTVVLHRDDEGRLYWRHLQETFCG
3EBT Chain:A ((5-115))
-----------NMQTVRESYEAFHR-RDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFI---ESGERIVVLGTRRVTAVNGRSATLKFVHVWRFE-NGRAVTFEDHFDTAE
General information:
TITO was launched using:
RESULT:
Template:
3EBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11147 for 622 contacts (-17.9/contact) +
2D Compatibility (PS) -10429 + (NN) -1175 + (LL) 1712
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -23389.0 ( -37.60 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_3EBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EBT-query.scw
PDB file :
Tito_Scwrl_3EBT.pdb
: