Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MSKPTVRVLALLELLQSHGQLSGSELARR--LEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAG-FKLPPLMFS--AEETLAVSLGLLAVRSLGLGESELAL-----ESAQAKLSR-----VMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERF-ERPADFDTLRHLRES----FARMPRAYPVEILMRAARE----QVV--AVLGEPLGLLAEVDG-GTLLRASTDDL-----DWFARRLCGLPFDFEVRQ-------PLELREPLR--------RQAERVLRNLGQEEASDHR---------------------------------------------------------- |
| 4C2E Chain:A ((2-436)) | ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKKEIEGLV-IDVRGNPGGY-------IQSVEEILKHF-VTKDQPYIQIAERNGDKKRYFSTLTHKKAYPVNVITDKGSAAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKK--GIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGIIDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53014 for 2208 contacts (-24.0/contact) +
2D Compatibility (PS) -31671 + (NN) 5827 + (LL) 576
1D Compatibility (HY) -6000 + (ID) 3350
Total energy: -87632.0 ( -39.69 by residue)
QMean score : 0.124
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