Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELVMALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT
4IHF Chain:K ((4-75))
-STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ--
General information:
TITO was launched using:
RESULT:
Template:
4IHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43925 for 482 contacts (-91.1/contact) +
2D Compatibility (PS) -8099 + (NN) -5719 + (LL) 416
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -66277.0 ( -137.50 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_4IHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IHF-query.scw
PDB file :
Tito_Scwrl_4IHF.pdb
: