Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK
3OSS Chain:C ((4-68))
-ETRLNVVLRGIAFGA--------RPGAVIEEGGKQQVYLQGER-LDSHNAVIEEINRDHVMLRYQGKIERLSLA---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25121 for 442 contacts (-56.8/contact) +
2D Compatibility (PS) -6419 + (NN) 3214 + (LL) 3544
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -27132.0 ( -61.38 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3OSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSS-query.scw
PDB file :
Tito_Scwrl_3OSS.pdb
: