Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MTRAINDPGNEDPGSLLETDADALLGGAAAQAPEE-----------RCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEP-LERECAGACRRFVEACRPLLPA--------------
1GUX Chain:A ((9-206))
NTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSENFSKLLNDNIFHMSLLACALEVVMATYSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK
General information:
TITO was launched using:
RESULT:
Template:
1GUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28314 for 961 contacts (-29.5/contact) +
2D Compatibility (PS) -14879 + (NN) -11053 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -61246.0 ( -63.73 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1GUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GUX-query.scw
PDB file :
Tito_Scwrl_1GUX.pdb
: