Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSYDDTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLEI
4L62 Chain:D ((4-190))
------DTRQHLLDTGYRIMAVKGFSGVGLNEILQSAGVPKGSFYHYFKSKEQFGQALLEDYFRVYLADMDQRFSAPGLNARERLMSYWQKWLDNACPPCDEQRCLVVKLSAEVADLSESMRITLRDGSDGIIERLVGCLGQGRDDGSLAPCDARHMASALYQLWLGASLLSKLHRSPGPLETAMQTTRSLLE-
General information:
TITO was launched using:
RESULT:
Template:
4L62.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102839 for 1376 contacts (-74.7/contact) +
2D Compatibility (PS) -20069 + (NN) -8974 + (LL) 516
1D Compatibility (HY) -26400 + (ID) 9350
Total energy: -167116.0 ( -121.45 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4L62.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L62-query.scw
PDB file :
Tito_Scwrl_4L62.pdb
: