Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFA-HRAPRHLRRVHIHAEPALRNPHLQRD |
| 1NX8 Chain:A ((2-272)) | ------SEIVKFNPV-----MASGFGAYID----HRDFLEAKTETIKNLLMRQGFVVVKNLDI--DSDTFRDIYSAYGTIVEYRDTLKLEG----EKGKIVTGRGQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDHALACQEMPAHLLRVLEE------ETFEVRVLWFKVPVFTDLGWVRKMLIY--FPFDEGQPA---SWEPRIVGFTDHETQAFFQELGAFLKQPRYYYKHFWEDGDLLIMDNRRVIHEREEFNDDDIVRRLYRGQTAD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135554 for 1943 contacts (-69.8/contact) +
2D Compatibility (PS) -25926 + (NN) -8097 + (LL) 2260
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -181217.0 ( -93.27 by residue)
QMean score : 0.404
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