Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGG-SDG-R-VVFSKLEGGIWSAPTIVAQAG-GQD----------FRDVAGGTMP-SGRIVAASTVYE------------------------------------------------------------------------------------------------TGEVKVYVSDDSGVTWVHKFTLARGG-AD--YN--FAHGKSFQVG-----ARYVIPLYAATG-----VNYELKWLESSDGGETWGEGSTIYSGN----------------TPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNV-TA-QNG-DS-TDILVAPSLSYIYSEGGTPHVVLLYTNRTTHFCYYRTILLA---KAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 2W20 Chain:A ((23-452)) | ------------------IKSYRIPALLKTDKGTLIAGADERRLHSSDWGDIGMVIRRSEDNGKTWGDRVTITNLRDNPKASDPSIGSPVNIDMVLVQDPETKRIFS-IYDMFPEGKGIFGMSSQKEEAYKKIDGKTYQILYREGEKGAYTIRENGTVYTPDGKATDYRVVVDPVKPAYSDKGDLYKGNQLLGNIYFTTNKTSPFRIAKDSYLWMSYSDDDGKTWSAPQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWHAGEAVNDNRQVDGQKIHSSTMNNRRAQNTESTVVQLNNGDVKLFMRGLTG---DLQVATSKDGGVTWEKDIKRYPQVKDVYVQMSAIHTMHEG--------KEYIILSNAGGPK-RENGMVHLARVEENG--E-LTWLKHNPI--QKGEFAYNSLQELGNGEYGILYEHTEK------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116398 for 2279 contacts (-51.1/contact) +
2D Compatibility (PS) -30994 + (NN) -13730 + (LL) 7004
1D Compatibility (HY) 1200 + (ID) 2450
Total energy: -155368.0 ( -68.17 by residue)
QMean score : 0.396
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