Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVDPWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN
1T92 Chain:B ((2-105))
---------------------------------GNKEKADRQKVVSDLVALEGALDMYKLDNSRYPTTEQGLQALVSAPSAEPHARNYPEGGYIRRLPQDPWGSDYQLLSPGQHGQVDIFSLGPDGVPESND---DIGNW--
General information:
TITO was launched using:
RESULT:
Template:
1T92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2658 for 715 contacts (-3.7/contact) +
2D Compatibility (PS) -11651 + (NN) -11593 + (LL) 4064
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -32338.0 ( -45.23 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1T92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T92-query.scw
PDB file :
Tito_Scwrl_1T92.pdb
: