Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVQVITRDGEAEYAVLPWAEYQALLAAAGRPAASVAVETTAPAPPSASLLERREARGLSLEQVAREVGISPSYMAMIERGEREASEAILFALERVLGKATGA
3U3W Chain:A ((4-61))
-------------------------------------------EKLGSEIKKIRVLRGLTQKQLSENI-CHQSEVSRIESGAVYPSMDILQGIAAKLQIPII-
General information:
TITO was launched using:
RESULT:
Template:
3U3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30659 for 381 contacts (-80.5/contact) +
2D Compatibility (PS) -6135 + (NN) -770 + (LL) 3860
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -36354.0 ( -95.42 by residue)
QMean score : 0.806
(partial model without unconserved sides chains):
PDB file :
Tito_3U3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U3W-query.scw
PDB file :
Tito_Scwrl_3U3W.pdb
: