Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFTSKPLSPQGRHVLITGASSGLGRETALHLAEQGFQVIAGVRRQEDGERLANACPS--GRISTLLIDVTDEESIGRAAAQVAEKVGDTGLWGLVNNAGICISAPLECVSSDLLRRQLEVNLIGQLAVTRAILP-LLRRGGAARLVNVTSGLGSVAIPYLGAYSAAQFAKEGVSDALRRELAPMGIQVSVVSPGAIWTPIWGKIASEGERALADAPDAVADLYRDTYLRFLQANEDGARNSATKPADVAAAVHAALTAAKPRTRYRVGADVRRGTLLARLLPDSVIDGMFRPIVTAAPAAKEEQRA
2JAP Chain:B ((3-239))-------SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG--GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGT--VVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE--------QRISQIRKLQAQ------------DIAEAVRYAVTAPHHATVHEI---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142810 for 2036 contacts (-70.1/contact) +
2D Compatibility (PS) -25893 + (NN) -9919 + (LL) 4288
1D Compatibility (HY) -10800 + (ID) 4250
Total energy: -189384.0 ( -93.02 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_2JAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAP-query.scw
PDB file : Tito_Scwrl_2JAP.pdb: