Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGF--EYSPNIVYGGPAPNQNSAPLAAYLIRHYG-ERVVFIGS-DYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSS-IDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDI-CIDAPQGPVRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3TD9 Chain:A ((16-359)) | ------VVKIAVILPMTGGISAFGRMVWEGIQIAHEEK---PTVLGEEVELVLLDTRSEKTEAANAAARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKR-VFFRSGD--QDFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTG--YILAGDGADAPELIEIGGEAVEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKE--PAALNALGYDAYMVLLDAIERAGSFDREKIAEEIRKTRNFNGASGIINIDENGDAI-KSVVVNIVK-NGSVDFEAV----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228586 for 3227 contacts (-70.8/contact) +
2D Compatibility (PS) -37479 + (NN) -21643 + (LL) 1556
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -296452.0 ( -91.87 by residue)
QMean score : 0.731
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