Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRSPLFS-----QFPLHERLLKALESLSFSEPTPVQAAAIPKALEG--HDLRVTAQTGSGKTAAFLLPLLHRLLAEDKPRSLARALILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRK----NPEIIIGTPGRLLEQRNAGNLPLQD---IEVLVLDEADRML-DMGFADDVLALANACPAERQTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVGELNENVRQQVITADDVAHKEQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHKVFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGD------EYVHRIGRTGRAGAEGLAISLI-CHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
| 3G0H Chain:A ((33-416)) | -PNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANK---YPQCLCLSPTYELALQTGKVIEQMGKF-YPELKLA-----YAVRGNKLERGQKISEQIVIGTPGTVLDW--CSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDS-VWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLD----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202877 for 3070 contacts (-66.1/contact) +
2D Compatibility (PS) -39567 + (NN) -19735 + (LL) 3416
1D Compatibility (HY) -31200 + (ID) 6650
Total energy: -296613.0 ( -96.62 by residue)
QMean score : 0.562
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