Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQNSLLDGRRVLLTGGARGLGYAFAEAAARAGARVVIADILEERVQRSARELAEQGLDISGLPLDLADPVSIERCVAAAVERLGGLDGLVNNASITNSGGKSCEELEIEVFDRVLQVNVRGTWLMTRACLPALRESGRGAVVNLASDTPLWGAPNLLAYSASKGALIAMTRSLARELGGDGITVNAIAPGLVEVEATE--YVPAARHRLYREQRALQRGQQPADVCGAVLFALSDLSRFITGQTLPVNGGFVMP
2ZAT Chain:B ((12-255))
------LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATE-EVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG----
General information:
TITO was launched using:
RESULT:
Template:
2ZAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141117 for 2106 contacts (-67.0/contact) +
2D Compatibility (PS) -26935 + (NN) -13975 + (LL) 964
1D Compatibility (HY) -20000 + (ID) 4400
Total energy: -205463.0 ( -97.56 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2ZAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZAT-query.scw
PDB file :
Tito_Scwrl_2ZAT.pdb
: