Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVESTLDKHAFLEALSEAGYPEGR
2XMM Chain:A ((3-64))
-IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEVE-
General information:
TITO was launched using:
RESULT:
Template:
2XMM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33048 for 440 contacts (-75.1/contact) +
2D Compatibility (PS) -6595 + (NN) -5321 + (LL) 308
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -49906.0 ( -113.42 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2XMM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XMM-query.scw
PDB file :
Tito_Scwrl_2XMM.pdb
: