Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKAPQPEVVATASRQNPGETLRQAREQKGLSLSQVAGQLNLTENSLRQLENGAFDKLPGHTFSRGYIRAYAKLMGLDQAELVNSFDHFTGTNASGSTVQSLGRVAEPVRLSRNVLRIVSLLLLALLIGFGYFWWQEHSARTPETAGLSLEHVEVESADGTTEIHTLDEPEDQAVIEAQKEGEQAPAEVSPEVAAQAEGAPPVASEGAQVPAAPAQGTPAAPQQPVTAAPAGTAPAPGTAPAVPATASPAAPPAPSEPAAAPVVAGEGQGVVKVQFVADCWTQVTDANGKVLVSALKRKGDSLELAGKAPLELRLGFARGAQVSYNGQPVDVTPFVRGETARLKVGQ |
2WUS Chain:R ((5-81)) | --------------WKELGETFRKKREERRITLLDASLFTNINPSKLKRIEEGDLKGLDAEVYIKSYIKRYSEFLELSPDEMLKLYEEGKE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20809 for 531 contacts (-39.2/contact) +
2D Compatibility (PS) -8341 + (NN) -1360 + (LL) 16472
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -20888.0 ( -39.34 by residue)
QMean score : 0.629
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