Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDL------NGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTD-IFELQEKMQSAGLPV
3SYL Chain:A ((130-209))
------------------------------------------------MGGVLFIDEAYYLYRPDDYGQEAIEILLQVMEN---NRD--DLVVILAGYADRMENFFQ-SNPGFRSRIAHHIEFPDYSD------
General information:
TITO was launched using:
RESULT:
Template:
3SYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30133 for 358 contacts (-84.2/contact) +
2D Compatibility (PS) -7149 + (NN) -1999 + (LL) 5216
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -38665.0 ( -108.00 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_3SYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SYL-query.scw
PDB file :
Tito_Scwrl_3SYL.pdb
: