Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGMIGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQFGTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYHGNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLAE-SPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG
2CUK Chain:C ((55-310))-------------------------------------------------------IDAEVMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRA-LAFGMRVVYHARTPKP-----LPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV--------


General information:
TITO was launched using:
RESULT:

Template: 2CUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164017 for 2008 contacts (-81.7/contact) +
2D Compatibility (PS) -27947 + (NN) -14541 + (LL) 4876
1D Compatibility (HY) -23200 + (ID) 6200
Total energy: -231029.0 ( -115.05 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_2CUK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CUK-query.scw
PDB file : Tito_Scwrl_2CUK.pdb: