Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED----GRGVAWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWV-GAYRGEIDE--ALYPRWPYDVDPIAVLSLKDNPPPPLEGLSRFRLSWMRGYAFARYFPT---LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYR--I--TDVTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE
2Y7I Chain:A ((3-228))
--------------------VSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQ-PYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLKNNRLEGVFGDVAAIGKWLKNNP-DYAIMDERASDPDYYGKGLGIAVRKD--NDALLQEINAALDKVKASPEYAQMQEKWFT-------------
General information:
TITO was launched using:
RESULT:
Template:
2Y7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120969 for 1717 contacts (-70.5/contact) +
2D Compatibility (PS) -22969 + (NN) -10369 + (LL) 3108
1D Compatibility (HY) -8400 + (ID) 1750
Total energy: -161349.0 ( -93.97 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_2Y7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y7I-query.scw
PDB file :
Tito_Scwrl_2Y7I.pdb
: