Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTNEDIINAVSEMSVMQVVELIKAMEEKFGVTAAAATVAAAGPAAAAAEEQTEFTIVLAEAG-DKKVNVIKVVRELTGLGLKEAKAVVDGAP----GVVKEGASKEEAEAAKKALEEA------GAKVELK
3O1F Chain:A ((27-103))
------------------------------------------------------MYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVF-TAEVAETKVA-VNKYARENEHPLLCTL-
General information:
TITO was launched using:
RESULT:
Template:
3O1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22617 for 422 contacts (-53.6/contact) +
2D Compatibility (PS) -7070 + (NN) -947 + (LL) 6120
1D Compatibility (HY) -6800 + (ID) 450
Total energy: -31764.0 ( -75.27 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_3O1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1F-query.scw
PDB file :
Tito_Scwrl_3O1F.pdb
: