Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATLFDPIVLGDLELPNRIVMAPLTRCRADE-GRVPNALMAEYYAQRADAGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRIS-DPLYLNGELPVAPSAIAAEGHVSLVRPKRPYV-----TPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFS-HVARELGKRGIAFICAREAQA------DDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGGTEGYLDYPTLA
1GVR Chain:A ((5-364))---LFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL-


General information:
TITO was launched using:
RESULT:

Template: 1GVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168986 for 3089 contacts (-54.7/contact) +
2D Compatibility (PS) -37984 + (NN) -24715 + (LL) 548
1D Compatibility (HY) -26000 + (ID) 8250
Total energy: -265387.0 ( -85.91 by residue)
QMean score : 0.640

(partial model without unconserved sides chains):
PDB file : Tito_1GVR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVR-query.scw
PDB file : Tito_Scwrl_1GVR.pdb: