Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLI----QVSGLRGK----GLK-SLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV--AGT----AN-RS------------LAPIA-----RRVCE---AF-----------PDTFP-----A-SDKRLTTGNPVRGELFLDAHARA-PLTGRRVNLLV-LGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAE-ITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 2IYF Chain:A ((8-399)) | --AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPV--FADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITS--YPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQ--------EGGWQRPAGAEKVVLVSLGSAFT--QP-AFYRECVRAFGNLPGWHLVLQIG---TPAELGE----LPDNVEVHDWVPQL-AILRQADLFVTHAGAGGSQEGLATATPMIAVPQ----AVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181133 for 2597 contacts (-69.7/contact) +
2D Compatibility (PS) -35552 + (NN) -14465 + (LL) 2132
1D Compatibility (HY) -4000 + (ID) 3850
Total energy: -236868.0 ( -91.21 by residue)
QMean score : 0.466
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