Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
2PCO Chain:A ((1-26)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMWSGMWRRKLKKLRNALKKKLKGEK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1129 for 94 contacts (12.0/contact) +
2D Compatibility (PS) -2756 + (NN) -1349 + (LL) 13812
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 8536.0 ( 90.81 by residue)
QMean score : 0.339
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