Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRSADLQGLRRTHFHAFFRRLHDGMFRRQGRPDALGGALDELLGDCRLLCFDEFHVHDIGDAMLITRLFRELFGRKITLVCTSN--YAPRQLLPNPLYHERFLPAIRLIETRMEVLEVAGARDYRTISPRQEIASGYASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFSTWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
3T15 Chain:A ((68-360)) | ------NLDNKLDGFYIAPAFMDKLVVHITKNFL-----------------------KLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGI-----NPIMMSAGELESGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDNNQMVNATLMNIADNPTENARVPIIVTGNDFSTAPLIRDGRMEKFYWAP---TREDRIGVCTGIFRTDNVPAEDVVKIVDNFPG------QSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKL-----------------------------------------------------------LNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62219 for 1833 contacts (-33.9/contact) +
2D Compatibility (PS) -27498 + (NN) -939 + (LL) 7900
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -87556.0 ( -47.77 by residue)
QMean score : 0.177
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