Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LA-YLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTG-HNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 2Q1W Chain:A ((21-320)) | -----------MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKD-PDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPR---NPANSSYAISKSANEDYLEY---SGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV-GHGAYHFSSGTDVAIKELYDAVVEAMALPSY-PEPEIR--------E----L---GP--------DDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGV--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Q1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200216 for 2555 contacts (-78.4/contact) +
2D Compatibility (PS) -32711 + (NN) -18542 + (LL) 3284
1D Compatibility (HY) -7200 + (ID) 2850
Total energy: -258235.0 ( -101.07 by residue)
QMean score : 0.392
|
|
|