Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKKKSEKESSWIGEIEKYSRQIWLAGLGAYSKVSKDGSKLFETLVKDGEKAEKEAKSDVDAQVGAAKASARSAKSKVDEVRDR-ALGKWSELEEAFDKRLNSAISRLGVPSRNEVKELHSKVDTLTKQIEKLTGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAKPAAKPAAKKTAAKTAAAKPAAKPAAKPTAKAAAKPATKPAAKAAAKPAAKPAAAKPAAKPAAKPAAATAAKPAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASSSAPAAPAATPAASAPAANAPATPSSQG |
| 3U4Z Chain:A ((375-483)) | ----------TLLISEVLKTSKQ-YLSVLAQVVDIQSSDKNIRLKIC------DNSCNQELKVVI---------FPDLCYEWRDKFSINKWYYFNE-FVRQIYNDEVQLKNNIHSSIKESDDQRKVITYNQEQGVF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11175 for 704 contacts (15.9/contact) +
2D Compatibility (PS) -10883 + (NN) 5179 + (LL) 12364
1D Compatibility (HY) -6000 + (ID) 950
Total energy: 10885.0 ( 15.46 by residue)
QMean score : 0.175
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