Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAIFAERALL-PE---GWARNVRFEISADGVLAEIRPDANA-----DGAERLGGAVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAVTPQQIATVLAAGHD-DLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDGIFPATDFLAQGGRLGIGSDSHV---SLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQP-IGSLAVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHAG--EERSARAFVQVLGELLD |
| 3HPA Chain:A ((32-475)) | --LVKHADVLVTMDDTRRELRDAGLYI-EDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA---QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNG---------SRLDDSIGAAQRIGMRFHASRGAMS---------------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAY-------TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGF------G--PDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFAG-ALHDPVAALVFCA-PSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAHALV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278517 for 3758 contacts (-74.1/contact) +
2D Compatibility (PS) -43040 + (NN) -12378 + (LL) 940
1D Compatibility (HY) -8000 + (ID) 4500
Total energy: -345495.0 ( -91.94 by residue)
QMean score : 0.499
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