Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEPTYYFLSILALTDVSLSMSTLPSMLSIYWFNAPQIVFDACIMQMFFIHVFGIVESGVLVSMAFDRFVAIRNPLHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLACAST-RINSLYGLIVVIFTLGLDVLLTLLSYVLTLKTVLGIVSRGERLKTLSTCLSHMSTVLLFYVPFMGAASMIHRFWEH-----L---SPV--VHMVMADIYLLLPPVLNPIVYSVKTKQI |
2LNL Chain:A ((40-312)) | --------------------------YVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAY---HP-NNSSPVCYEVL-----GNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-GQKHRAMRVIFAVVLIFLLCWLPYNLV-LLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194830 for 1929 contacts (-101.0/contact) +
2D Compatibility (PS) -25572 + (NN) 1065 + (LL) 2124
1D Compatibility (HY) -24400 + (ID) 2300
Total energy: -243913.0 ( -126.45 by residue)
QMean score : 0.221
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