Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGFYHVGQAAFELLTSSFILVGFSDRPHLELIVFVVVLIFYLLTLLGNMTIVLLSALDSRLHTPMYFFLANLSFLDMCFTTGSIPQMLYNLWGPDKTISYVGCAIQLYFVLALGGVECVLLAVMAYDRYAAVCKPLHYTIIMHPRLCGQLASVAWLSGFGNSLIMAPQTLMLPRCGHRRVDHFLCEMPALIGMACVDTMMLEALAFALAIFIILAPLILILISYGYVGGTVLRIKSAA-----------GRKKAFNTCSSHLIVVSLFYGTIIYMYLQPANTYS---QD---QGKFLTLFYTIVTPSVNPLIYTLRNKDVKEAMKKVLGKGSAEI
2KS9 Chain:A ((34-324))-------------------------------LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYS-T--TE--TMPSRVVCMIEWPEHP---NKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFIS


General information:
TITO was launched using:
RESULT:

Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -254449 for 2144 contacts (-118.7/contact) +
2D Compatibility (PS) -28062 + (NN) -10582 + (LL) 3224
1D Compatibility (HY) -22400 + (ID) 2000
Total energy: -314269.0 ( -146.58 by residue)
QMean score : 0.249

(partial model without unconserved sides chains):
PDB file : Tito_2KS9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KS9-query.scw
PDB file : Tito_Scwrl_2KS9.pdb: